Basic Information
Locus ID:
Sp3g11230.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
strubbelig-receptor family 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch3-1 | 3831167 | 3834510 | + | Sp3g11230.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.36 | 74,944.34 Da | 41.29 | 80.15 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 418 | 682 | 3.1E-39 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 66 | 2.1E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 141 | 199 | 5.1E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 27 | 237 | 2.47E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 389 | 682 | 8.61E-67 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 378 | 491 | 5.5E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 137 | 6.6E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 138 | 248 | 6.0E-24 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 492 | 685 | 3.3E-50 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 414 | 685 | 34.802868 | IPR000719 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 95 | 108 | 4.2E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 162 | 175 | 4.2E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 266 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13065.1 | STRUBBELIG-receptor family 4. | 0 |
| RefSeq | XP_006407265.1 | protein STRUBBELIG-RECEPTOR FAMILY 4 [Eutrema salsugineum] | 0 |
| Q6R2K2 | Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana OX=3702 GN=SRF4 PE=2 SV=1 | 0 | |
| TrEMBL | V4M8L5 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10020193mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology