Basic Information
Locus ID:
Sp3g08420.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
recA homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch3-1 | 2825224 | 2827428 | + | Sp3g08420.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.68 | 42,817.57 Da | 37.54 | 99.17 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 67 | 329 | 1.4E-82 | IPR013765 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 85 | 315 | 8.57E-40 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 93 | 388 | 2.2E-86 | IPR027417 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 94 | 253 | 25.042961 | IPR020588 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 260 | 334 | 16.46043 | IPR020587 |
| PRINTS | PR00142 | RecA protein signature | 272 | 300 | 9.4E-58 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 358 | 375 | 9.4E-58 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 224 | 253 | 9.4E-58 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 305 | 334 | 9.4E-58 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 186 | 215 | 9.4E-58 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 152 | 181 | 9.4E-58 | IPR013765 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10140.1 | RECA homolog 3. | 0 |
| RefSeq | XP_024015771.1 | DNA repair protein recA homolog 2, mitochondrial isoform X2 [Eutrema salsugineum] | 0 |
| Q8RY99 | DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g10140 PE=2 SV=1 | 0 | |
| TrEMBL | V4M9J9 | DNA repair protein recA homolog 2, mitochondrial OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10020901mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology