Basic Information
Locus ID:
Sp3g08190.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
F-box family protein-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch3-1 | 2754665 | 2756373 | - | Sp3g08190.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.50 | 49,395.49 Da | 44.95 | 77.54 | -0.25 |
Protein Domain:
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20620.1 | F-box family protein-related. | 0 |
| RefSeq | XP_013629521.1 | PREDICTED: uncharacterized protein LOC106335521 [Brassica oleracea var. oleracea] | 0 |
| TrEMBL | A0A3P6FUF2 | F-box domain-containing protein (Fragment) OS=Brassica oleracea OX=3712 GN=BOLC1T03010H PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg19076, jg21476 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G20620.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10022358m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 3 | Sp3g08190.v2.2, Sp3g18620.v2.2, Sp3g18660.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB01g043170.2N, BniB01g043700.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq01G1238 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl01G1376 |