Basic Information
Locus ID:
Sp3g08010.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Tudor PWWP MBT superfamily protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch3-1 | 2696879 | 2699739 | + | Sp3g08010.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.98 | 79,920.30 Da | 50.06 | 62.56 | -0.82 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 225 | 311 | 3.4879E-35 | - |
| Pfam | PF00855 | PWWP domain | 227 | 308 | 1.2E-16 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 222 | 331 | 1.14E-26 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 215 | 318 | 3.4E-23 | - |
| SMART | SM00293 | PWWP_4 | 225 | 286 | 2.8E-9 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 227 | 288 | 14.075603 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 93 | 139 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 623 | 645 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 700 | 731 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 706 | 731 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 184 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 593 | 645 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 419 | 459 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 487 | 511 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 153 | 191 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 104 | 139 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 487 | 547 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 525 | 547 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 605 | 622 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09670.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_020885880.1 | uncharacterized protein LOC9320812 [Arabidopsis lyrata subsp. lyrata] | 0 |
| Q9SF36 | PWWP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PDP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A565B5S8 | PWWP domain-containing protein OS=Arabis nemorensis OX=586526 GN=ANE_LOCUS7471 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology