Basic Information
Locus ID:
Sp3g05580.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
kinase) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch3-1 | 1890456 | 1894095 | - | Sp3g05580.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.11 | 80,430.58 Da | 45.35 | 74.30 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00130 | PAS | 84 | 164 | 5.0775E-8 | IPR000014 |
| CDD | cd13999 | STKc_MAP3K-like | 443 | 700 | 1.07384E-90 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 437 | 700 | 2.7E-48 | IPR001245 |
| Pfam | PF00989 | PAS fold | 78 | 163 | 5.6E-8 | IPR013767 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 78 | 165 | 4.54E-14 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 405 | 699 | 9.96E-62 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 561 | 714 | 6.8E-42 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 427 | 514 | 6.2E-30 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 76 | 170 | 1.9E-17 | - |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 78 | 163 | 5.3E-7 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 437 | 710 | 30.096245 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 360 | 400 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 372 | 400 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 51 | - | - |
| Coils | Coil | Coil | 6 | 33 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06620.1 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_020886821.1 | mitogen-activated protein kinase kinase kinase YODA isoform X1 [Arabidopsis lyrata subsp. lyrata] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | D7L5X4 | Kinase family protein OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_477969 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology