Basic Information
Locus ID:
Sp3g05570.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
kinase) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch3-1 | 1886142 | 1889527 | - | Sp3g05570.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.22 | 73,237.97 Da | 47.42 | 77.98 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00130 | PAS | 80 | 178 | 4.84683E-12 | IPR000014 |
| CDD | cd13999 | STKc_MAP3K-like | 429 | 660 | 1.90231E-125 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 423 | 659 | 6.6E-62 | IPR001245 |
| Pfam | PF00989 | PAS fold | 72 | 176 | 2.3E-12 | IPR013767 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 394 | 659 | 1.48E-79 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 75 | 178 | 4.01E-19 | IPR035965 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 80 | 183 | 1.4E-22 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 416 | 500 | 2.5E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 502 | 660 | 3.5E-56 | - |
| SMART | SM00091 | pas_2 | 71 | 138 | 1.9E-6 | IPR000014 |
| SMART | SM00220 | serkin_6 | 423 | 651 | 7.9E-45 | IPR000719 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 69 | 178 | 3.1E-13 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 423 | 660 | 40.597809 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 69 | 140 | 15.479261 | IPR000014 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 542 | 554 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 355 | 379 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 379 | - | - |
| Coils | Coil | Coil | 6 | 36 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06620.1 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_013583451.1 | PREDICTED: dual specificity protein kinase shkD-like [Brassica oleracea var. oleracea] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1J3D6D0 | Serine/threonine-protein kinase EDR1 OS=Noccaea caerulescens OX=107243 GN=GA_TR19246_c0_g1_i1_g.61939 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology