Basic Information
Locus ID:
Sp3g01200.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
LRR receptor-like serine threonine-protein kinase RPK2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch3-1 | 370724 | 374713 | + | Sp3g01200.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.35 | 124,155.74 Da | 36.43 | 97.02 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 868 | 1136 | 3.726E-88 | - |
| Pfam | PF13855 | Leucine rich repeat | 649 | 707 | 1.3E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 250 | 272 | 0.0044 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 174 | 215 | 5.9E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 66 | 3.4E-12 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 864 | 1063 | 1.6E-44 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 120 | 479 | 3.22E-55 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 555 | 754 | 1.46E-34 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 842 | 1133 | 1.24E-74 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 226 | 1.2E-46 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 519 | 747 | 7.6E-50 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 824 | 937 | 9.0E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 938 | 1138 | 2.9E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 344 | 476 | 3.4E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 227 | 343 | 2.0E-29 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 296 | 320 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 154 | 177 | 86.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 670 | 693 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 202 | 226 | 71.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 621 | 645 | 73.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 248 | 272 | 290.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 178 | 201 | 160.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 862 | 1140 | 8.0E-34 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 694 | 717 | 30.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 862 | 1136 | 39.396416 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 982 | 994 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 868 | 890 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.1 | receptor-like protein kinase 2. | 0 |
| RefSeq | XP_024015000.1 | LRR receptor-like serine/threonine-protein kinase RPK2 isoform X1 [Eutrema salsugineum] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1J3G8E2 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Noccaea caerulescens OX=107243 GN=LC_TR5179_c0_g1_i1_g.18132 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology