Basic Information
Locus ID:
Sp3g01050.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
WRKY Transcription Factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch3-1 | 327298 | 329499 | - | Sp3g01050.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.73 | 50,331.13 Da | 49.68 | 51.91 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 344 | 401 | 1.1E-24 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 198 | 254 | 1.8E-24 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 335 | 403 | 4.18E-29 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 195 | 256 | 2.22E-25 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 328 | 404 | 2.0E-35 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 179 | 257 | 1.8E-26 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 197 | 255 | 3.4E-35 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 343 | 402 | 3.8E-38 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 338 | 403 | 37.73431 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 198 | 256 | 24.030294 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 409 | 425 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 405 | 425 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 311 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 440 | 462 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 246 | 271 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01080.2 | - | 0 |
| RefSeq | XP_018513310.2 | probable WRKY transcription factor 58 isoform X2 [Brassica rapa] | 0 |
| Q93WU7 | Probable WRKY transcription factor 58 OS=Arabidopsis thaliana OX=3702 GN=WRKY58 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6G8R868 | WRKY17 transcription factor OS=Isatis tinctoria OX=161756 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology