Basic Information
Locus ID:
Sp3g00450.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
(NAC) domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch3-1 | 128213 | 130445 | - | Sp3g00450.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.13 | 39,765.35 Da | 35.38 | 76.22 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 56 | 196 | 2.7E-19 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 40 | 214 | 4.45E-36 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 64 | 219 | 1.6E-24 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 55 | 214 | 28.976854 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 217 | 247 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01600.1 | NAC domain containing protein 44. | 0 |
| RefSeq | XP_010435640.1 | PREDICTED: NAC domain-containing protein 8-like isoform X1 [Camelina sativa] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2AR97 | NAC domain superfamily OS=Arabidopsis thaliana x Arabidopsis arenosa OX=1240361 GN=ISN45_Aa03g000480 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology