Basic Information
Locus ID:
Sp2g28810.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch2-4 | 8964630 | 8967706 | + | Sp2g28810.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 109,676.13 Da | 32.57 | 96.05 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 685 | 981 | 3.0E-42 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 554 | 575 | 1.9 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 434 | 454 | 1.3 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 65 | 1.7E-8 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 171 | 192 | 0.8 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 77 | 389 | 6.83E-51 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 679 | 985 | 8.23E-69 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 336 | 616 | 5.18E-46 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 206 | 312 | 1.4E-29 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 679 | 761 | 3.3E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 313 | 622 | 1.2E-84 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 762 | 992 | 3.1E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 22 | 205 | 2.6E-37 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 241 | 265 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 432 | 455 | 360.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 551 | 575 | 4.2 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 479 | 503 | 41.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 683 | 991 | 8.4E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 168 | 191 | 68.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 683 | 991 | 36.993637 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 553 | 574 | 7.280716 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 810 | 822 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 689 | 712 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 551 | 564 | 8.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 434 | 447 | 8.9E-5 | - |
| Coils | Coil | Coil | 981 | 992 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65710.1 | HAESA-like 2. | 0 |
| RefSeq | XP_018457995.1 | PREDICTED: LRR receptor-like serine/threonine-protein kinase HSL2 [Raphanus sativus] | 0 |
| C0LGX3 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A565CXJ0 | Protein kinase domain-containing protein OS=Arabis nemorensis OX=586526 GN=ANE_LOCUS28600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology