Basic Information
Locus ID:
Sp2g28750.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch2-4 | 8928246 | 8931196 | + | Sp2g28750.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.06 | 36,375.67 Da | 49.00 | 70.44 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 66 | 326 | 1.7E-85 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 212 | 317 | 2.45E-20 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 212 | 330 | 9.5E-42 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 216 | 318 | 26.074217 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 158 | 180 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 158 | 183 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65670.1 | indole-3-acetic acid inducible 9. auxin (indole-3-acetic acid) induced gene | 0 |
| RefSeq | NP_851275.1 | indole-3-acetic acid inducible 9 [Arabidopsis thaliana] | 0 |
| Q38827 | Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1 | 0 | |
| TrEMBL | A0A654GEE8 | Auxin-responsive protein OS=Arabidopsis thaliana OX=3702 GN=AN1_LOCUS26895 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology