Basic Information
Locus ID:
Sp2g24680.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch2-4 | 7402122 | 7405370 | - | Sp2g24680.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.98 | 113,857.56 Da | 36.36 | 94.93 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 343 | 402 | 2.0E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 75 | 7.1E-6 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 718 | 989 | 1.4E-47 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 272 | 331 | 7.0E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 83 | 138 | 2.0E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 248 | 270 | 0.42 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 439 | 454 | 1.7 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 83 | 386 | 1.26E-64 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 311 | 626 | 6.97E-52 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 718 | 993 | 2.43E-72 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 316 | 635 | 8.1E-84 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 697 | 796 | 1.1E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 197 | 315 | 3.2E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 196 | 1.9E-41 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 797 | 1010 | 4.6E-60 | - |
| SMART | SM00220 | serkin_6 | 715 | 992 | 1.6E-33 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 342 | 366 | 29.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 102 | 125 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 294 | 317 | 6.8 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 198 | 222 | 370.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 463 | 486 | 290.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 557 | 581 | 330.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 246 | 269 | 290.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 318 | 341 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 438 | 462 | 31.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 126 | 150 | 18.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 715 | 1003 | 38.435307 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 721 | 744 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 844 | 856 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_006394500.1 | leucine-rich repeat receptor-like protein kinase TDR [Eutrema salsugineum] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | V4MK48 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10003570mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology