Basic Information
Locus ID:
Sp2g20970.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch2-4 | 5874557 | 5876192 | + | Sp2g20970.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.07 | 22,402.09 Da | 40.82 | 83.07 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17135 | Ribosomal protein 60S L18 and 50S L18e | 17 | 202 | 1.7E-92 | IPR021131 |
| SUPERFAMILY | SSF52080 | Ribosomal proteins L15p and L18e | 35 | 154 | 2.49E-25 | IPR036227 |
| Gene3D | G3DSA:3.100.10.10 | - | 16 | 202 | 2.9E-96 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 166 | 202 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 179 | 202 | - | - |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05590.1 | ribosomal protein L18. Encodes cytoplasmic ribosomal protein L18. | 0 |
| RefSeq | XP_048629341.1 | 60S ribosomal protein L18-2-like [Brassica napus] | 0 |
| P42791 | Large ribosomal subunit protein eL18y OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2 | 0 | |
| TrEMBL | A0A8D9HA77 | (field mustard) hypothetical protein OS=Brassica campestris OX=3711 GN=BRAPAZ1V2_A02P47070.2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology