Basic Information
Locus ID:
Sp2g19110.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Small ubiquitinrelated modifier
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch2-4 | 5184992 | 5185495 | - | Sp2g19110.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.18 | 13,062.78 Da | 35.45 | 71.75 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 28 | 99 | 4.7E-11 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 16 | 102 | 3.7E-15 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 12 | 102 | 3.9E-23 | - |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 25 | 104 | 9.13399 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G48710.1 | Ubiquitin-like superfamily protein. | 0 |
| RefSeq | XP_009151670.1 | putative small ubiquitin-related modifier 6 [Brassica rapa] | 0 |
| Q9FKC5 | Putative small ubiquitin-related modifier 4 OS=Arabidopsis thaliana OX=3702 GN=SUMO4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A397Z6I7 | Ubiquitin-like domain-containing protein OS=Brassica campestris OX=3711 GN=BRARA_F02986 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology