Basic Information
Locus ID:
Sp2g18350.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch2-4 | 4934716 | 4936986 | - | Sp2g18350.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.43 | 83,828.95 Da | 44.41 | 91.94 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 454 | 736 | 8.71836E-93 | - |
| Pfam | PF00069 | Protein kinase domain | 452 | 732 | 3.0E-42 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 427 | 734 | 2.02E-74 | IPR011009 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 70 | 297 | 7.85E-19 | IPR009091 |
| Gene3D | G3DSA:2.130.10.30 | - | 140 | 353 | 2.5E-20 | IPR009091 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 414 | 535 | 2.0E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 536 | 744 | 1.2E-54 | - |
| SMART | SM00220 | serkin_6 | 448 | 706 | 6.5E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 448 | 738 | 37.601398 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 454 | 476 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 580 | 592 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_006395237.1 | serine/threonine-protein kinase-like protein CCR4 [Eutrema salsugineum] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | V4KYM0 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10003696mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology