Basic Information
Locus ID:
Sp2g17850.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
RING-type zinc-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch2-4 | 4730644 | 4732420 | + | Sp2g17850.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.63 | 30,014.62 Da | 52.43 | 98.93 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13445 | RING-type zinc-finger | 54 | 87 | 1.5E-7 | IPR027370 |
| SUPERFAMILY | SSF57850 | RING/U-box | 49 | 112 | 2.44E-10 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 43 | 144 | 9.2E-12 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 54 | 109 | 10.158304 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 73 | 82 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 141 | 181 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G29270.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | NP_189573.1 | RING/U-box superfamily protein [Arabidopsis thaliana] | 0 |
| TrEMBL | A0A384LEC9 | RING-type domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=AXX17_At3g32170 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology