Basic Information
Locus ID:
Sp2g16450.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch2-4 | 4195591 | 4198363 | - | Sp2g16450.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.73 | 56,207.50 Da | 45.30 | 81.10 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 332 | 355 | 0.011 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 309 | 328 | 0.5 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 275 | 356 | 4.32E-9 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 243 | 293 | 2.07E-6 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 250 | 403 | 5.9E-14 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 333 | 358 | 29.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 307 | 332 | 0.25 | IPR006553 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G27290.1 | RNI-like superfamily protein. | 0 |
| RefSeq | XP_006395459.1 | F-box protein At3g27290 [Eutrema salsugineum] | 0 |
| Q9LK24 | F-box protein At3g27290 OS=Arabidopsis thaliana OX=3702 GN=At3g27290 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1J3ESG6 | F-box protein OS=Noccaea caerulescens OX=107243 GN=LC_TR2835_c0_g1_i1_g.11361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology