Basic Information
Locus ID:
Sp2g16310.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
L-type lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch2-4 | 4148048 | 4150108 | + | Sp2g16310.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.61 | 76,005.81 Da | 39.92 | 84.56 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 20 | 262 | 1.40559E-75 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 21 | 269 | 9.2E-52 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 363 | 637 | 8.8E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 347 | 638 | 2.43E-65 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 28 | 262 | 1.26E-53 | IPR013320 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 328 | 440 | 1.0E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 441 | 644 | 1.5E-55 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 18 | 277 | 9.0E-57 | - |
| SMART | SM00220 | serkin_6 | 362 | 640 | 1.5E-20 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 362 | 649 | 33.940693 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 368 | 390 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 492 | 504 | - | IPR008271 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 146 | 152 | - | IPR019825 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42120.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_006395475.1 | L-type lectin-domain containing receptor kinase S.6 [Eutrema salsugineum] | 0 |
| Q9FHX3 | L-type lectin-domain containing receptor kinase S.6 OS=Arabidopsis thaliana OX=3702 GN=LECRKS6 PE=2 SV=1 | 0 | |
| TrEMBL | V4MMK6 | non-specific serine/threonine protein kinase OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10005258mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology