Basic Information
Locus ID:
Sp2g16100.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
May serve as docking site to facilitate the association of other proteins to the plasma membrane
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch2-4 | 4083111 | 4083971 | + | Sp2g16100.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 13,420.41 Da | 66.73 | 79.58 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01814 | Ubl_MUBs_plant | 6 | 93 | 1.63976E-43 | - |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 6 | 118 | 1.0E-37 | IPR039540 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 2 | 97 | 2.28E-27 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 99 | 6.8E-42 | - |
| PIRSF | PIRSF032572 | MUB | 1 | 120 | 1.2E-50 | IPR017000 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 7 | 73 | 10.375188 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26980.1 | membrane-anchored ubiquitin-fold protein 4 precursor. | 0 |
| RefSeq | XP_024007108.1 | membrane-anchored ubiquitin-fold protein 4 [Eutrema salsugineum] | 0 |
| Q9LSD8 | Membrane-anchored ubiquitin-fold protein 4 OS=Arabidopsis thaliana OX=3702 GN=MUB4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1J3HM43 | Membrane-anchored ubiquitin-fold protein OS=Noccaea caerulescens OX=107243 GN=GA_TR11175_c0_g1_i1_g.36091 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology