Basic Information
Locus ID:
Sp2g15140.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
homocysteine S-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch2-4 | 3748171 | 3750311 | + | Sp2g15140.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 36,540.34 Da | 34.24 | 87.93 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 22 | 321 | 9.8E-77 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 18 | 326 | 1.31E-82 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 10 | 322 | 8.2E-101 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 279 | 330 | 0.052 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 1 | 250 | 7.4E-9 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 9 | 323 | 49.353954 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25900.1 | Homocysteine S-methyltransferase family protein. | 0 |
| RefSeq | XP_006395613.1 | homocysteine S-methyltransferase 1 [Eutrema salsugineum] | 0 |
| A4ZGQ8 | Homocysteine S-methyltransferase 1 OS=Brassica oleracea var. italica OX=36774 GN=HMT1 PE=1 SV=1 | 0 | |
| TrEMBL | V4KNL5 | Hcy-binding domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10004584mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology