Basic Information
Locus ID:
Sp2g13250.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch2-4 | 2958410 | 2961389 | - | Sp2g13250.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 102,154.50 Da | 33.13 | 92.92 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 596 | 873 | 3.5444E-93 | - |
| Pfam | PF00069 | Protein kinase domain | 591 | 868 | 6.5E-49 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 369 | 428 | 2.7E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 332 | 366 | 2.1E-4 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 62 | 0.0088 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 61 | 435 | 2.38E-49 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 578 | 893 | 6.34E-81 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 326 | 9.7E-80 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 552 | 667 | 1.3E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 668 | 888 | 1.1E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 329 | 453 | 7.6E-36 | IPR032675 |
| SMART | SM00220 | serkin_6 | 590 | 875 | 1.6E-44 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 111 | 134 | 0.0031 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 391 | 414 | 76.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 186 | 209 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 259 | 283 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 415 | 437 | 7.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 90 | 112 | 7.041994 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 590 | 873 | 40.371662 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 393 | 416 | 7.303818 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 596 | 618 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 715 | 727 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 904 | 950 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 480 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 903 | 950 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 450 | 480 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01820.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_006395848.1 | receptor-like kinase TMK3 [Eutrema salsugineum] | 0 |
| Q9SIT1 | Receptor-like kinase TMK3 OS=Arabidopsis thaliana OX=3702 GN=TMK3 PE=1 SV=1 | 0 | |
| TrEMBL | V4KPC1 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10003606mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology