Basic Information
Locus ID:
Sp2g13080.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch2-4 | 2885795 | 2888180 | - | Sp2g13080.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 54,049.62 Da | 33.16 | 90.54 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 23 | 342 | 2.9E-86 | IPR000490 |
| Pfam | PF07983 | X8 domain | 360 | 431 | 5.1E-19 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 23 | 342 | 6.18E-88 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 22 | 348 | 1.8E-118 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 353 | 466 | 2.1E-10 | - |
| SMART | SM00768 | X8_cls | 359 | 444 | 2.7E-47 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 257 | 270 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01630.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_006395867.1 | glucan endo-1,3-beta-glucosidase 3 [Eutrema salsugineum] | 0 |
| Q9ZU91 | Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=2 SV=2 | 0 | |
| TrEMBL | V4L0B5 | glucan endo-1,3-beta-D-glucosidase OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10004013mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology