Basic Information
Locus ID:
Sp2g10760.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch2-4 | 1999770 | 2004203 | - | Sp2g10760.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.50 | 78,507.28 Da | 51.69 | 85.42 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 70 | 6.5E-11 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 414 | 664 | 1.1E-19 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 32 | 186 | 7.14E-25 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 413 | 664 | 2.56E-34 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 214 | 2.4E-32 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 484 | 677 | 1.5E-30 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 378 | 483 | 5.8E-14 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 363 | 668 | 15.48169 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 306 | 327 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_024011020.1 | protein MALE DISCOVERER 1 [Eutrema salsugineum] | 0 |
| C0LGU7 | Protein MALE DISCOVERER 1 OS=Arabidopsis thaliana OX=3702 GN=MDIS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1J3FZD1 | Putative LRR receptor-like serine/threonine-protein kinase OS=Noccaea caerulescens OX=107243 GN=LC_TR5127_c0_g1_i1_g.17924 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology