Basic Information
Locus ID:
Sp2g08080.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch2-4 | 629890 | 636462 | + | Sp2g08080.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.41 | 111,760.33 Da | 28.39 | 96.77 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 686 | 949 | 4.21413E-96 | - |
| Pfam | PF11721 | Malectin domain | 422 | 597 | 6.5E-34 | IPR021720 |
| Pfam | PF00069 | Protein kinase domain | 683 | 889 | 5.2E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 657 | 949 | 1.34E-79 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 90 | 403 | 1.5E-44 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 642 | 755 | 2.0E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 276 | 398 | 2.9E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 196 | 275 | 4.3E-15 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 756 | 962 | 3.4E-56 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 422 | 600 | 1.0E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 53 | 195 | 1.3E-23 | IPR032675 |
| SMART | SM00220 | serkin_6 | 680 | 949 | 1.5E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 680 | 955 | 36.824028 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 686 | 708 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 801 | 813 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56140.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_013599086.1 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140 [Brassica oleracea var. oleracea] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3P6E0J4 | Protein kinase domain-containing protein OS=Brassica oleracea OX=3712 GN=BOLC7T43107H PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology