HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Sp2g08000.v2.2
Species & Taxonomic ID: Schrenkiella parvula & 98039
Genome Assembly: v2.2
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
ch2-4 599019 600091 - Sp2g08000.v2.2
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.73 37,706.17 Da 44.64 79.17 -0.67
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Best hit
Source Best Hit ID Description E-value
TrEMBL A0A565CSB3 Protein CASC3 OS=Arabis nemorensis OX=586526 GN=ANE_LOCUS26868 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Brassicaceae Schrenkiella parvula 26 Sp1g30460.v2.2, Sp1g31270.v2.2, Sp1g31830.v2.2 ...
Sp2g06820.v2.2, Sp2g08000.v2.2, Sp3g22870.v2.2, Sp3g24010.v2.2, Sp3g25030.v2.2, Sp3g25310.v2.2, Sp4g06980.v2.2, Sp4g07460.v2.2, Sp4g09460.v2.2, Sp4g09617.v2.2, Sp5g21160.v2.2, Sp6g10080.v2.2, Sp6g10120.v2.2, Sp6g10150.v2.2, Sp7g03190.v2.2, Sp7g08700.v2.2, Sp7g10020.v2.2, Sp7g10650.v2.2, SpUn0014_0020.v2.2, SpUn0094_0030.v2.2, SpUn0667_0010.v2.2, SpUn0675_0010.v2.2, SpUn1142_0010.v2.2
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.