Basic Information
Locus ID:
Sp2g06300.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch2-2 | 2279296 | 2283619 | - | Sp2g06300.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.83 | 56,191.85 Da | 60.37 | 56.66 | -1.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04438 | HIT zinc finger | 471 | 502 | 9.4E-8 | IPR007529 |
| Pfam | PF04795 | PAPA-1-like conserved region | 371 | 454 | 1.6E-20 | IPR006880 |
| SMART | SM01406 | PAPA_1_2 | 370 | 455 | 2.2E-28 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 307 | 337 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 273 | 291 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 96 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 361 | 433 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 306 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 105 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 243 | 435 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 148 | 176 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 19 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 148 | 198 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 49 | - | - |
| Coils | Coil | Coil | 293 | 339 | - | - |
| Coils | Coil | Coil | 237 | 257 | - | - |
| Coils | Coil | Coil | 369 | 396 | - | - |
| Coils | Coil | Coil | 408 | 428 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56460.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | NP_176041.2 | HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] | 0 |
| TrEMBL | Q8GYE3 | HIT zinc finger and PAPA-1-like domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=At1g56460 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology