HalophFGD

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Basic Information
Locus ID: Sp2g04170.v2.2
Species & Taxonomic ID: Schrenkiella parvula & 98039
Genome Assembly: v2.2
Description: protein modification by small protein conjugation or removal
Maps and Mapping Data
Chromosome Start End Strand ID
ch2-2 878290 879588 - Sp2g04170.v2.2
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.12 34,406.43 Da 33.48 93.20 -0.35
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd00121 MATH 8 130 1.87834E-29 IPR002083
Pfam PF00917 MATH domain 15 131 1.6E-15 IPR002083
SUPERFAMILY SSF49599 TRAF domain-like 6 135 1.96E-31 -
Gene3D G3DSA:2.60.210.10 Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 1 135 7.0E-33 IPR008974
SMART SM00061 math_3 8 112 1.7E-13 IPR002083
ProSiteProfiles PS50144 MATH/TRAF domain profile. 6 129 24.226366 IPR002083
Coils Coil Coil 243 270 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K00276 (primary-amine oxidase [EC:1.4.3.21])
Pathway:
ko00260 (Glycine, serine and threonine metabolism) map00260 (Glycine, serine and threonine metabolism) ko00350 (Tyrosine metabolism) map00350 (Tyrosine metabolism) ko00360 (Phenylalanine metabolism) map00360 (Phenylalanine metabolism) ko00410 (beta-Alanine metabolism) map00410 (beta-Alanine metabolism) ko00950 (Isoquinoline alkaloid biosynthesis) map00950 (Isoquinoline alkaloid biosynthesis) ko00960 (Tropane, piperidine and pyridine alkaloid biosynthesis) map00960 (Tropane, piperidine and pyridine alkaloid biosynthesis) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites)
Reaction:
R02382 (Tyramine + H2O + Oxygen <=> 4-Hydroxyphenylacetaldehyde + Ammonia + Hydrogen peroxide) R02529 (Aminoacetone + H2O + Oxygen <=> Methylglyoxal + Ammonia + Hydrogen peroxide) R02613 (Phenethylamine + Oxygen + H2O <=> Phenylacetaldehyde + Ammonia + Hydrogen peroxide) R03139 (1,3-Diaminopropane + Oxygen + H2O <=> 3-Aminopropanal + Ammonia + Hydrogen peroxide) R04027 (N-Methylputrescine + Oxygen + H+ <=> 1-Methylpyrrolinium + Hydrogen peroxide + Ammonia) R04300 (Dopamine + H2O + Oxygen <=> 3,4-Dihydroxyphenylacetaldehyde + Ammonia + Hydrogen peroxide) R06154 (Methylamine + Oxygen + H2O <=> Formaldehyde + Ammonia + Hydrogen peroxide) R06740 (Cadaverine + H2O + Oxygen <=> 5-Aminopentanal + Ammonia + Hydrogen peroxide)
Best hit
Source Best Hit ID Description E-value
TAIR AT2G42470.1 TRAF-like family protein. 0
RefSeq XP_022558020.1 MATH domain and coiled-coil domain-containing protein At2g42470 [Brassica napus] 0
Swiss-Prot P0DKG5 MATH domain and coiled-coil domain-containing protein At2g42470 OS=Arabidopsis thaliana OX=3702 GN=At2g42470 PE=4 SV=1 0
TrEMBL A0A078IDD9 (rape) hypothetical protein OS=Brassica napus OX=3708 GN=BnaC09g14620D PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Chenopodium album 2 gene:ENSEOMG00000020776, gene:ENSEOMG00000042009
Anacardiaceae Pistacia vera 2 pistato.v30053150, pistato.v30053760
Asparagaceae Asparagus officinalis 3 AsparagusV1_04.1844.V1.1, AsparagusV1_05.3047.V1.1 ...
AsparagusV1_09.696.V1.1
Brassicaceae Arabidopsis thaliana 38 AT1G31370.1, AT1G31380.1, AT1G31390.1, AT1G31400.1 ...
AT2G01790.1, AT2G05400.1, AT2G05410.1, AT2G05420.1, AT2G05430.1, AT2G42460.1, AT2G42470.1, AT2G42480.1, AT3G27040.1, AT3G29580.1, AT3G44790.1, AT3G44800.1, AT3G44805.1, AT3G58200.1, AT3G58210.1, AT3G58220.2, AT3G58230.1, AT3G58240.1, AT3G58250.1, AT3G58260.1, AT3G58270.1, AT3G58280.1, AT3G58290.1, AT3G58320.1, AT3G58330.1, AT3G58340.1, AT3G58350.1, AT3G58360.1, AT3G58370.1, AT3G58380.1, AT3G58400.1, AT3G58410.1, AT3G58430.1, AT3G58440.1
Brassicaceae Eutrema salsugineum 38 Thhalv10005920m.g.v1.0, Thhalv10006412m.g.v1.0 ...
Thhalv10006427m.g.v1.0, Thhalv10006437m.g.v1.0, Thhalv10006449m.g.v1.0, Thhalv10006467m.g.v1.0, Thhalv10006470m.g.v1.0, Thhalv10006486m.g.v1.0, Thhalv10008254m.g.v1.0, Thhalv10010958m.g.v1.0, Thhalv10011795m.g.v1.0, Thhalv10011971m.g.v1.0, Thhalv10011981m.g.v1.0, Thhalv10011998m.g.v1.0, Thhalv10012015m.g.v1.0, Thhalv10012031m.g.v1.0, Thhalv10012069m.g.v1.0, Thhalv10012071m.g.v1.0, Thhalv10012142m.g.v1.0, Thhalv10012179m.g.v1.0, Thhalv10016883m.g.v1.0, Thhalv10017071m.g.v1.0, Thhalv10017566m.g.v1.0, Thhalv10023572m.g.v1.0, Thhalv10023616m.g.v1.0, Thhalv10023897m.g.v1.0, Thhalv10023954m.g.v1.0, Thhalv10023996m.g.v1.0, Thhalv10024005m.g.v1.0, Thhalv10024153m.g.v1.0, Thhalv10026867m.g.v1.0, Thhalv10028053m.g.v1.0, Thhalv10028058m.g.v1.0, Thhalv10028109m.g.v1.0, Thhalv10028307m.g.v1.0, Thhalv10028318m.g.v1.0, Thhalv10029184m.g.v1.0, Thhalv10029219m.g.v1.0
Brassicaceae Schrenkiella parvula 18 Sp1g34680.v2.2, Sp2g04170.v2.2, Sp2g04180.v2.2 ...
Sp4g24600.v2.2, Sp4g24610.v2.2, Sp5g04440.v2.2, Sp5g04450.v2.2, Sp5g04453.v2.2, Sp5g04457.v2.2, Sp5g04460.v2.2, Sp5g04480.v2.2, Sp5g04500.v2.2, Sp5g04510.v2.2, Sp5g21580.v2.2, Sp6g09200.v2.2, Sp6g09210.v2.2, Sp7g05400.v2.2, SpUn0053_0040.v2.2
Brassicaceae Brassica nigra 59 BniB01g003420.2N, BniB01g003430.2N, BniB01g003440.2N ...
BniB01g003450.2N, BniB01g025850.2N, BniB02g000230.2N, BniB02g001350.2N, BniB02g040450.2N, BniB02g049390.2N, BniB02g051720.2N, BniB03g001240.2N, BniB03g010160.2N, BniB03g011950.2N, BniB03g051100.2N, BniB03g052390.2N, BniB03g055960.2N, BniB04g020230.2N, BniB04g020250.2N, BniB04g020290.2N, BniB04g020300.2N, BniB04g020330.2N, BniB06g001540.2N, BniB06g054900.2N, BniB06g054910.2N, BniB06g054920.2N, BniB06g054930.2N, BniB06g054940.2N, BniB06g054960.2N, BniB06g054970.2N, BniB06g054980.2N, BniB06g054990.2N, BniB06g055000.2N, BniB06g055010.2N, BniB06g055020.2N, BniB06g055030.2N, BniB06g055040.2N, BniB06g055050.2N, BniB06g055060.2N, BniB06g055080.2N, BniB06g055090.2N, BniB06g055100.2N, BniB06g055120.2N, BniB06g055130.2N, BniB06g055140.2N, BniB06g055150.2N, BniB06g063480.2N, BniB06g063490.2N, BniB06g063500.2N, BniB06g063510.2N, BniB06g063530.2N, BniB06g063540.2N, BniB07g008670.2N, BniB07g045970.2N, BniB07g046280.2N, BniB07g046490.2N, BniB08g027490.2N, BniB08g072890.2N, BniB08g072950.2N, BniB08g073000.2N
Casuarinaceae Casuarina glauca 1 Cgl05G1118
Plantaginaceae Plantago ovata 1 Pov_00021253
Poaceae Zoysia japonica 1 nbis-gene-36802
Salicaceae Populus euphratica 1 populus_peu12364
Solanaceae Solanum pennellii 1 gene-LOC107019779
Zosteraceae Zostera marina 6 Zosma01g13790.v3.1, Zosma02g07570.v3.1, Zosma03g09470.v3.1 ...
Zosma03g10120.v3.1, Zosma05g15530.v3.1, Zosma05g17230.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.