Basic Information
Locus ID:
Sp2g00270.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Calcineurin B-like protein 8
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch2-1 | 103788 | 106428 | + | Sp2g00270.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 24,982.29 Da | 37.79 | 92.04 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 117 | 184 | 1.00631E-11 | IPR002048 |
| Pfam | PF13202 | EF hand | 79 | 100 | 0.031 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 117 | 182 | 2.4E-9 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 24 | 207 | 1.82E-42 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 23 | 216 | 3.7E-65 | - |
| SMART | SM00054 | efh_1 | 77 | 105 | 3.3 | IPR002048 |
| SMART | SM00054 | efh_1 | 158 | 186 | 0.0051 | IPR002048 |
| SMART | SM00054 | efh_1 | 114 | 142 | 3.2 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 154 | 189 | 11.500702 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 110 | 145 | 10.133827 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 73 | 108 | 11.444912 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 167 | 179 | - | IPR018247 |
| PRINTS | PR00450 | Recoverin family signature | 128 | 146 | 8.1E-8 | - |
| PRINTS | PR00450 | Recoverin family signature | 174 | 194 | 8.1E-8 | - |
| PRINTS | PR00450 | Recoverin family signature | 81 | 102 | 8.1E-8 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
ko04010 (MAPK signaling pathway)
map04010 (MAPK signaling pathway)
ko04020 (Calcium signaling pathway)
map04020 (Calcium signaling pathway)
ko04022 (cGMP-PKG signaling pathway)
map04022 (cGMP-PKG signaling pathway)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04218 (Cellular senescence)
map04218 (Cellular senescence)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04370 (VEGF signaling pathway)
map04370 (VEGF signaling pathway)
map04650 (Natural killer cell mediated cytotoxicity)
map04658 (Th1 and Th2 cell differentiation)
map04659 (Th17 cell differentiation)
map04660 (T cell receptor signaling pathway)
map04662 (B cell receptor signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64480.1 | calcineurin B-like protein 8. calcineurin B-like protein 8, member of plant-specific family of calcium sensor proteins containing 3 EF-hand motifs | 0 |
| RefSeq | XP_013609480.1 | PREDICTED: calcineurin B-like protein 8 [Brassica oleracea var. oleracea] | 0 |
| Q9FUQ7 | Calcineurin B-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=CBL8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A078IBE3 | Calcineurin B-like protein OS=Brassica napus OX=3708 GN=BnaC09g11000D PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology