Basic Information
Locus ID:
Sp1g40260.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch1-2 | 4626650 | 4630447 | + | Sp1g40260.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 77,593.72 Da | 39.77 | 87.56 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 117 | 176 | 1.1E-10 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 415 | 683 | 2.7E-37 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 69 | 3.8E-8 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 95 | 110 | 0.26 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 395 | 686 | 1.54E-67 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 27 | 232 | 2.31E-40 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 250 | 5.8E-48 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 493 | 706 | 4.5E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 376 | 491 | 3.9E-25 | - |
| SMART | SM00369 | LRR_typ_2 | 164 | 187 | 3.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 188 | 210 | 81.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 94 | 122 | 21.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 414 | 688 | 35.043144 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 420 | 443 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 327 | 361 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 245 | 259 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 698 | 717 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 319 | 382 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 245 | 283 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_006304699.1 | protein STRUBBELIG-RECEPTOR FAMILY 6 [Capsella rubella] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6D2HZD7 | Protein kinase domain-containing protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS5759 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology