Basic Information
Locus ID:
Sp1g38550.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch1-2 | 3913284 | 3913550 | - | Sp1g38550.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.28 | 9,647.98 Da | 68.08 | 83.07 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 74 | 3.9E-7 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G51910.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_009144870.1 | probable LRR receptor-like serine/threonine-protein kinase At1g51860 [Brassica rapa] | 0 |
| C0LGG4 | Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana OX=3702 GN=At1g51860 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8X7WFI2 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_011038 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.9AG0011870 |
| Apiaceae | Apium graveolens | 1 | Ag7G01769 |
| Arecaceae | Cocos nucifera | 1 | scaffold036689G000030 |
| Asteraceae | Flaveria trinervia | 1 | Ftri1G02955 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp1g38550.v2.2 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g13040 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_057048 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr18G014370 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC1BG062190, gene_TRIDC3AG042260 ... |
| Poaceae | Triticum aestivum | 2 | TraesCS1D02G346800.1.cds1, TraesCS6D02G120500.1.cds1 |
| Poaceae | Zoysia japonica | 4 | nbis-gene-13858, nbis-gene-13860, nbis-gene-13863 ... |
| Zosteraceae | Zostera marina | 1 | Zosma05g12140.v3.1 |