Basic Information
Locus ID:
Sp1g37430.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Probably inactive leucine-rich repeat receptor-like protein kinase At1g50610
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch1-2 | 3444081 | 3446304 | + | Sp1g37430.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.96 | 76,432.01 Da | 42.98 | 86.19 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 373 | 641 | 1.7E-27 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 43 | 86 | 3.2E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 136 | 196 | 1.9E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 71 | 230 | 1.63E-26 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 374 | 647 | 4.57E-46 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 45 | 157 | 1.4E-18 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 446 | 664 | 1.2E-38 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 338 | 445 | 6.4E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 158 | 252 | 9.8E-19 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 370 | 646 | 26.788889 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 248 | 263 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 248 | 269 | - | - |
| Coils | Coil | Coil | 626 | 646 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G50610.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_006393130.1 | pollen receptor-like kinase 5 [Eutrema salsugineum] | 0 |
| Q9LPT1 | Pollen receptor-like kinase 5 OS=Arabidopsis thaliana OX=3702 GN=PRK5 PE=1 SV=1 | 0 | |
| TrEMBL | V4MGF9 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10012173mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology