Basic Information
Locus ID:
Sp1g35440.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
serine threonine protein kinase IREH1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch1-2 | 2561822 | 2565562 | - | Sp1g35440.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.87 | 71,586.96 Da | 43.81 | 92.29 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05579 | STKc_MAST_like | 266 | 554 | 8.42724E-172 | - |
| Pfam | PF00069 | Protein kinase domain | 260 | 549 | 3.5E-65 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 257 | 589 | 5.46E-89 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 344 | 567 | 5.6E-106 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 258 | 578 | 5.6E-106 | - |
| SMART | SM00133 | pkinase_C_6 | 550 | 636 | 0.0015 | IPR000961 |
| SMART | SM00220 | serkin_6 | 260 | 549 | 1.3E-102 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 550 | 638 | 10.801994 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 260 | 549 | 52.145287 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 379 | 391 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 108 | 134 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 109 | 130 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 580 | 622 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 580 | 604 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48490.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_009107349.1 | probable serine/threonine protein kinase IRE3 isoform X1 [Brassica rapa] | 0 |
| F4HYG2 | Probable serine/threonine protein kinase IRE3 OS=Arabidopsis thaliana OX=3702 GN=IRE3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A816ZPT4 | (rape) hypothetical protein OS=Brassica napus OX=3708 GN=DARMORV10_A08P04660.1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology