Basic Information
Locus ID:
Sp1g35430.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
ATP binding kinase protein serine threonine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch1-2 | 2557466 | 2559735 | + | Sp1g35430.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.46 | 67,946.63 Da | 36.51 | 90.47 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 67 | 6.7E-8 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 345 | 608 | 1.0E-37 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 85 | 131 | 1.6E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 40 | 191 | 1.85E-35 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 345 | 615 | 2.95E-59 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 416 | 623 | 4.0E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 310 | 415 | 2.3E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 201 | 9.1E-44 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 341 | 613 | 32.923046 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 168 | 190 | 7.1113 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 347 | 369 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 282 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 203 | 227 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 289 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 204 | 218 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_006393400.1 | probable inactive receptor kinase At1g48480 [Eutrema salsugineum] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | V4MHA2 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10011300mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology