Basic Information
Locus ID:
Sp1g29440.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch1-1 | 11496783 | 11500366 | + | Sp1g29440.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.31 | 68,869.96 Da | 42.21 | 94.06 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 66 | 4.6E-10 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 305 | 576 | 2.5E-44 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 281 | 577 | 1.13E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 191 | 5.67E-39 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 212 | 3.8E-62 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 271 | 378 | 6.3E-39 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 379 | 596 | 4.2E-69 | - |
| SMART | SM00220 | serkin_6 | 302 | 576 | 1.3E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 302 | 589 | 35.73571 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 308 | 330 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 425 | 437 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34210.1 | somatic embryogenesis receptor-like kinase 2. Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development controlling male gametophyte production. | 0 |
| RefSeq | XP_010478854.1 | PREDICTED: somatic embryogenesis receptor kinase 2 [Camelina sativa] | 0 |
| Q9XIC7 | Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=SERK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6D2HXG8 | Protein kinase domain-containing protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS5914 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology