Basic Information
Locus ID:
Sp1g28940.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch1-1 | 11207804 | 11208847 | + | Sp1g28940.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.60 | 37,604.01 Da | 43.46 | 98.25 | -0.04 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G33530.1 | F-box family protein. | 0 |
| RefSeq | XP_033147545.1 | putative F-box protein At1g33530 [Brassica rapa] | 0 |
| Q9C800 | Putative F-box protein At1g33530 OS=Arabidopsis thaliana OX=3702 GN=At1g33530 PE=4 SV=1 | 0 | |
| TrEMBL | A0A397ZBK9 | (field mustard) hypothetical protein OS=Brassica campestris OX=3711 GN=BRAA05T21312Z PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 4 | AT1G33530.1, AT1G71320.1, AT3G62350.1, AT3G62380.1 |
| Brassicaceae | Eutrema salsugineum | 4 | Thhalv10009802m.g.v1.0, Thhalv10009811m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 5 | Sp1g28940.v2.2, Sp1g29020.v2.2, Sp1g33930.v2.2 ... |
| Brassicaceae | Brassica nigra | 2 | BniB05g024070.2N, BniB08g066240.2N |