Basic Information
Locus ID:
Sp1g27240.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
SH3 domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch1-1 | 10405778 | 10408183 | - | Sp1g27240.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.82 | 48,311.29 Da | 53.21 | 74.79 | -0.84 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 367 | 415 | 4.8E-12 | IPR001452 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 43 | 254 | 3.89E-26 | IPR027267 |
| SUPERFAMILY | SSF50044 | SH3-domain | 363 | 420 | 1.44E-15 | IPR036028 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 42 | 258 | 3.4E-10 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 343 | 427 | 1.7E-16 | - |
| SMART | SM00326 | SH3_2 | 363 | 418 | 2.9E-13 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 360 | 419 | 20.000912 | IPR001452 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 350 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 350 | - | - |
| Coils | Coil | Coil | 145 | 179 | - | - |
| Coils | Coil | Coil | 189 | 209 | - | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G31440.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_006415327.1 | SH3 domain-containing protein 1 [Eutrema salsugineum] | 0 |
| Q9C865 | SH3 domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=SH3P1 PE=1 SV=1 | 0 | |
| TrEMBL | V4K7T4 | SH3 domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10007690mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology