Basic Information
Locus ID:
Sp1g26840.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch1-1 | 10216125 | 10218611 | - | Sp1g26840.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.89 | 73,779.80 Da | 37.05 | 85.74 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 14 | 202 | 4.03279E-109 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 27 | 181 | 8.4E-15 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 184 | 231 | 1.2E-12 | IPR001404 |
| Pfam | PF00183 | Hsp90 protein | 233 | 638 | 1.0E-193 | IPR001404 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 5 | 213 | 3.85E-74 | IPR036890 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 490 | 611 | 3.4E-37 | IPR037196 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 221 | 466 | 2.88E-98 | IPR020568 |
| Gene3D | G3DSA:1.20.120.790 | - | 466 | 616 | 4.2E-65 | IPR037196 |
| Gene3D | G3DSA:3.40.50.11260 | - | 379 | 465 | 2.4E-41 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 1 | 211 | 1.6E-92 | IPR036890 |
| Gene3D | G3DSA:3.30.230.80 | - | 212 | 378 | 5.3E-73 | - |
| SMART | SM00387 | HKATPase_4 | 27 | 182 | 3.1E-8 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 1 | 648 | 6.5E-237 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 25 | 34 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 26 | 48 | 3.0E-84 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 118 | 140 | 3.0E-84 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 170 | 187 | 3.0E-84 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 188 | 206 | 3.0E-84 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 75 | 92 | 3.0E-84 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 5 | 25 | 3.0E-84 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 93 | 110 | 3.0E-84 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 2 | 612 | 25.754999 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 622 | 648 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 215 | 235 | - | - |
| Coils | Coil | Coil | 470 | 490 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56010.1 | heat shock protein 81-3. A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Overexpression reduced tolerance to heat and conferred higher tolerance to calcium. | 0 |
| RefSeq | XP_002869603.1 | heat shock protein 90-2 [Arabidopsis lyrata subsp. lyrata] | 0 |
| P51818 | Heat shock protein 90-3 OS=Arabidopsis thaliana OX=3702 GN=HSP90-3 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8T1YJD1 | Heat shock protein Hsp90 family OS=Arabidopsis suecica OX=45249 GN=ISN44_As12g015220 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology