Basic Information
Locus ID:
Sp1g23130.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch1-1 | 8578764 | 8581519 | - | Sp1g23130.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 96,957.93 Da | 36.10 | 95.72 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 554 | 824 | 6.33191E-94 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 59 | 0.15 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 325 | 362 | 0.0021 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 385 | 425 | 3.2E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 548 | 822 | 7.5E-47 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 26 | 297 | 2.81E-42 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 325 | 431 | 9.83E-18 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 534 | 851 | 1.17E-79 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 318 | 5.4E-74 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 513 | 625 | 4.9E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 626 | 840 | 8.0E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 323 | 449 | 4.0E-31 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 252 | 275 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 183 | 206 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 108 | 131 | 5.6 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 412 | 434 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 388 | 411 | 100.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 548 | 825 | 6.7E-43 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 548 | 828 | 40.286861 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 554 | 576 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 673 | 685 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G24650.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_013596877.1 | PREDICTED: receptor-like kinase TMK2 [Brassica oleracea var. oleracea] | 0 |
| Q9FYK0 | Receptor-like kinase TMK2 OS=Arabidopsis thaliana OX=3702 GN=TMK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0D3D6L4 | Protein kinase domain-containing protein OS=Brassica oleracea var. oleracea OX=109376 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology