Basic Information
Locus ID:
Sp1g22630.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
No apical meristem (NAM) protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch1-1 | 8339130 | 8341890 | + | Sp1g22630.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.93 | 53,013.85 Da | 43.08 | 64.07 | -0.92 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 59 | 192 | 3.4E-18 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 43 | 211 | 4.18E-37 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 67 | 216 | 1.3E-28 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 58 | 211 | 30.885342 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 295 | 364 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 295 | 354 | - | - |
| Coils | Coil | Coil | 327 | 347 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25580.1 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. | 0 |
| RefSeq | XP_006415888.1 | SUPPRESSOR OF GAMMA RESPONSE 1 [Eutrema salsugineum] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | V4MR78 | NAC domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10007551mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology