Basic Information
Locus ID:
Sp1g21680.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Domain of unknown function (DUF569)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch1-1 | 7968080 | 7972422 | + | Sp1g21680.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.92 | 60,219.75 Da | 48.50 | 67.30 | -0.72 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04601 | Domain of unknown function (DUF569) | 1 | 144 | 2.4E-74 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 254 | 395 | 4.7E-73 | IPR007679 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 258 | 393 | 1.44E-24 | IPR008999 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 5 | 145 | 9.42E-22 | IPR008999 |
| Gene3D | G3DSA:2.80.10.50 | - | 5 | 144 | 4.9E-15 | - |
| Gene3D | G3DSA:2.80.10.50 | - | 262 | 389 | 3.6E-17 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 158 | 188 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 408 | 458 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 436 | 452 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 159 | 187 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G27100.1 | Actin cross-linking protein. | 0 |
| RefSeq | XP_022569312.2 | uncharacterized protein LOC111212161 [Brassica napus] | 0 |
| TrEMBL | A0A3P6EUP3 | Actin cross-linking OS=Brassica oleracea OX=3712 GN=BOLC5T31087H PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology