Basic Information
Locus ID:
Sp1g16870.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch1-1 | 6055016 | 6057296 | - | Sp1g16870.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 54,589.28 Da | 34.57 | 89.40 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 40 | 262 | 2.32116E-115 | - |
| Pfam | PF13499 | EF-hand domain pair | 384 | 444 | 3.7E-11 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 49 | 263 | 6.6E-63 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 309 | 370 | 1.7E-8 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 48 | 282 | 1.48E-71 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 291 | 470 | 3.2E-42 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 272 | 447 | 4.0E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 35 | 90 | 7.5E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 91 | 271 | 1.3E-60 | - |
| SMART | SM00220 | serkin_6 | 1 | 263 | 2.8E-69 | IPR000719 |
| SMART | SM00054 | efh_1 | 418 | 446 | 6.7E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 346 | 374 | 7.5E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 310 | 338 | 9.3E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 382 | 410 | 0.081 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 342 | 377 | 10.747526 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 378 | 413 | 12.114401 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 414 | 449 | 13.453381 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 263 | 41.361042 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 306 | 341 | 14.513405 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 427 | 439 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 319 | 331 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 125 | 137 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 355 | 367 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 30 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18890.1 | calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. | 0 |
| RefSeq | XP_006416554.1 | calcium-dependent protein kinase 10 [Eutrema salsugineum] | 0 |
| Q9M9V8 | Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CPK10 PE=1 SV=1 | 0 | |
| TrEMBL | E4MX56 | mRNA, clone: RTFL01-16-P22 OS=Eutrema halophilum OX=98038 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology