Basic Information
Locus ID:
Sp1g14910.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Contains the following InterPro domains UspA (InterPro IPR006016), Serine threonine-protein kinase domain (InterPro IPR002290), Serine-threonine tyrosine-protein kinase (InterPro IPR001245), Serine threonine-protein kinase, active site (InterPro IPR008271), Protein kinase-like domain (InterPro IPR011009), Rossmann-like alpha beta alpha sandwich fold (InterPro IPR014729), Protein kinase, catalytic domain (InterPro IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro IPR020635)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch1-1 | 5335468 | 5340965 | + | Sp1g14910.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 84,777.84 Da | 50.53 | 77.06 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 17 | 157 | 1.20981E-58 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 452 | 703 | 1.6E-39 | IPR001245 |
| Pfam | PF00582 | Universal stress protein family | 18 | 145 | 3.2E-9 | IPR006016 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 18 | 154 | 1.09E-9 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 428 | 703 | 1.31E-66 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 522 | 726 | 1.6E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 418 | 521 | 3.0E-25 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 16 | 154 | 1.3E-10 | IPR014729 |
| SMART | SM00220 | serkin_6 | 449 | 708 | 1.0E-23 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 449 | 711 | 35.283424 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 567 | 579 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 738 | 762 | - | - |
| Coils | Coil | Coil | 381 | 408 | - | - |
| Coils | Coil | Coil | 321 | 341 | - | - |
| Coils | Coil | Coil | 347 | 379 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16760.2 | - | 0 |
| RefSeq | XP_024008625.1 | U-box domain-containing protein 52 [Eutrema salsugineum] | 0 |
| Q9FKG5 | U-box domain-containing protein 51 OS=Arabidopsis thaliana OX=3702 GN=PUB51 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8T2C1Y7 | UspA OS=Arabidopsis thaliana x Arabidopsis arenosa OX=1240361 GN=ISN45_Aa01g009020 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology