Basic Information
Locus ID:
Sp1g14250.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
mitotic sister chromatid cohesion
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch1-1 | 5113378 | 5117775 | + | Sp1g14250.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.34 | 107,506.04 Da | 51.41 | 70.32 | -0.89 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48371 | ARM repeat | 23 | 238 | 3.71E-7 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 616 | 658 | 6.24E-7 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 608 | 665 | 6.8E-10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 446 | 484 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 590 | 614 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 395 | 414 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 697 | 950 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 310 | 326 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 769 | 844 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 699 | 718 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 492 | 583 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 342 | 356 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 719 | 733 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 300 | 614 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 747 | 761 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 852 | 932 | - | - |
| Coils | Coil | Coil | 942 | 962 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G15940.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_006416861.1 | glutamic acid-rich protein [Eutrema salsugineum] | 0 |
| Q9S9P0 | Sister chromatid cohesion protein PDS5 homolog E OS=Arabidopsis thaliana OX=3702 GN=PDS5E PE=2 SV=1 | 0 | |
| TrEMBL | V4KV58 | Tudor domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10006733mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology