Basic Information
Locus ID:
Sp1g12320.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Short Name:
WRKY4
Description:
Transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch1-1 | 4428168 | 4430602 | + | Sp1g12320.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.47 | 54,850.03 Da | 57.81 | 55.57 | -0.77 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 224 | 280 | 2.1E-26 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 405 | 462 | 1.4E-24 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 222 | 282 | 2.62E-26 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 396 | 464 | 4.32E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 389 | 465 | 1.3E-35 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 208 | 283 | 3.4E-29 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 404 | 463 | 1.7E-38 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 223 | 281 | 6.6E-39 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 399 | 464 | 37.96386 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 224 | 282 | 24.856667 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 321 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 386 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 332 | 347 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 350 | 373 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 166 | 200 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_006417073.1 | probable WRKY transcription factor 4 [Eutrema salsugineum] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A565ARS1 | WRKY transcription factor 3 OS=Arabis nemorensis OX=586526 GN=ANE_LOCUS1699 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology