Basic Information
Locus ID:
Sp1g09820.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch1-1 | 3475906 | 3479963 | + | Sp1g09820.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.35 | 81,862.86 Da | 48.06 | 85.21 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 476 | 740 | 7.0E-32 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 122 | 181 | 3.0E-9 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 453 | 742 | 5.48E-60 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 34 | 216 | 6.8E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 553 | 745 | 2.0E-43 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 11 | 227 | 1.4E-42 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 439 | 552 | 1.3E-24 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 475 | 746 | 31.933666 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 426 | 446 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11130.1 | Leucine-rich repeat protein kinase family protein. Encodes a receptor-like kinase protein with a predicted extracellular domain of six leucine-rich repeats and an intracellular serine-threonine kinase domain expressed throughout the developing root. Regulates expression of GLABRA2, CAPRICE, WEREWOLF, and ENHANCER OF GLABRA3. Required for floral organ shape, the development of the outer integument of ovules, and stem development. Regulates cell shape and cell division planes in the L2 layer of floral meristems and the L1-derived outer integument of ovules. Controls specification of epidermal root hairs. Participates in the coordination of cell morphogenesis between cell layers during floral development. | 0 |
| RefSeq | XP_006417386.1 | protein STRUBBELIG [Eutrema salsugineum] | 0 |
| Q8RWZ1 | Protein STRUBBELIG OS=Arabidopsis thaliana OX=3702 GN=SUB PE=1 SV=1 | 0 | |
| TrEMBL | V4KWL2 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10006881mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology