Basic Information
Locus ID:
Sp1g07250.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch1-1 | 2500019 | 2503105 | + | Sp1g07250.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.11 | 113,501.36 Da | 42.05 | 101.36 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 243 | 302 | 4.6E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 530 | 589 | 1.2E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 99 | 121 | 1.9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 70 | 2.4E-7 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 713 | 972 | 2.2E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 705 | 999 | 7.01E-70 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 47 | 352 | 9.52E-58 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 254 | 596 | 5.57E-70 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 807 | 1012 | 2.2E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 378 | 625 | 4.4E-70 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 710 | 806 | 5.6E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 93 | 377 | 4.0E-89 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 92 | 2.0E-9 | IPR032675 |
| SMART | SM00220 | serkin_6 | 711 | 999 | 3.9E-37 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 552 | 576 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 458 | 480 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 289 | 313 | 80.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 97 | 120 | 37.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 193 | 217 | 52.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 337 | 361 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 528 | 551 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 433 | 457 | 160.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 711 | 1006 | 39.594292 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 717 | 742 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 849 | 861 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G08590.1 | Leucine-rich receptor-like protein kinase family protein. similar to CLV1-like leucine rich repeat transmembrane receptor-like protein kinase (Ipomoea nil) (U77888) | 0 |
| RefSeq | XP_006417669.1 | leucine-rich repeat receptor-like protein kinase PXL1 [Eutrema salsugineum] | 0 |
| Q9FRS6 | Leucine-rich repeat receptor-like protein kinase PXL1 OS=Arabidopsis thaliana OX=3702 GN=PXL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1J3J631 | Leucine-rich repeat receptor-like protein kinase PXL1 OS=Noccaea caerulescens OX=107243 GN=MP_TR6520_c0_g1_i1_g.19160 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology