Basic Information
Locus ID:
Sp1g02410.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Leucine-rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch1-1 | 802241 | 803428 | + | Sp1g02410.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.62 | 43,062.19 Da | 36.57 | 107.92 | 0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 147 | 168 | 0.098 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 238 | 252 | 1.4 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 66 | 4.0E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 367 | 6.46E-43 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 190 | 1.2E-35 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 191 | 368 | 1.7E-27 | IPR032675 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 147 | 160 | 1.2E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 237 | 250 | 1.2E-5 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_006418235.1 | LRR receptor-like serine/threonine-protein kinase ERL1 [Eutrema salsugineum] | 0 |
| TrEMBL | A0A1J3ET48 | LRRNT_2 domain-containing protein OS=Noccaea caerulescens OX=107243 GN=GA_TR2142_c0_g1_i1_g.6988 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology