Basic Information
Locus ID:
Sgl82936
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB9 | 35660888 | 35670598 | + | Sgl82936 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.79 | 67,817.00 Da | 41.33 | 102.56 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 58 | 91 | 1.6E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 55 | 132 | 2.88E-11 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 201 | 385 | 3.14E-11 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 42 | 95 | 2.1E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 177 | 583 | 8.4E-14 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 56 | 91 | 9.603447 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03100.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_021852597.1 | FBD-associated F-box protein At1g66310-like [Spinacia oleracea] | 0 |
| Q501G5 | F-box protein At5g03100 OS=Arabidopsis thaliana OX=3702 GN=At5g03100 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1S3BH70 | putative F-box/LRR-repeat protein At3g18150 OS=Cucumis melo OX=3656 GN=LOC103489997 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology