Basic Information
Locus ID:
Sgl82842
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB9 | 34886538 | 34890769 | + | Sgl82842 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.78 | 97,307.11 Da | 61.68 | 65.72 | -0.90 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16647 | mRING-HC-C3HC5_NEU1 | 808 | 846 | 4.74944E-16 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 806 | 852 | 1.6E-10 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 791 | 853 | 1.7E-6 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 794 | 859 | 3.3E-10 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 808 | 847 | 10.217316 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 318 | 339 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 383 | 397 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 82 | 124 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 685 | 699 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 369 | 404 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 107 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 712 | 726 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 685 | 727 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 434 | 449 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 538 | 579 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 434 | 472 | - | - |
| Coils | Coil | Coil | 736 | 763 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27950.1 | Ring/U-Box superfamily protein. | 0 |
| RefSeq | XP_021732900.1 | uncharacterized protein LOC110699684 [Chenopodium quinoa] | 0 |
| Q24746 | Protein neuralized OS=Drosophila virilis OX=7244 GN=neur PE=4 SV=1 | 0 | |
| TrEMBL | A0A0K9S214 | RING-type domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_008300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology