Basic Information
Locus ID:
Sgl82834
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Acyl-CoA N-acyltransferase with RING FYVE PHD-type zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB9 | 34801448 | 34811787 | - | Sgl82834 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.53 | 84,925.30 Da | 38.81 | 83.35 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16135 | Tify domain binding domain | 332 | 380 | 1.5E-14 | IPR032308 |
| Pfam | PF00628 | PHD-finger | 399 | 439 | 7.4E-8 | IPR019787 |
| Pfam | PF16135 | Tify domain binding domain | 149 | 204 | 1.2E-15 | IPR032308 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 486 | 548 | 1.09E-8 | IPR011011 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 637 | 728 | 1.9E-7 | IPR016181 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 378 | 440 | 3.09E-17 | IPR011011 |
| Gene3D | G3DSA:3.40.630.30 | - | 587 | 756 | 2.4E-6 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 462 | 557 | 1.4E-11 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 391 | 455 | 3.6E-17 | IPR013083 |
| SMART | SM00249 | PHD_3 | 398 | 439 | 3.7E-11 | IPR001965 |
| SMART | SM00249 | PHD_3 | 487 | 544 | 0.092 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 396 | 441 | 10.3444 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 399 | 438 | - | IPR019786 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27980.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_010689922.2 | uncharacterized protein LOC104903573 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9Z0E3 | Autoimmune regulator OS=Mus musculus OX=10090 GN=Aire PE=1 SV=1 | 0 | |
| TrEMBL | A0A803N6I5 | PHD-type domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology